BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F12SP1|AL426723
(614 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig701 1043 0.0
>3x_Contig701
Length = 1480
Score = 1043 bits (514), Expect = 0.0
Identities = 577/614 (93%)
Strand = Plus / Plus
Query: 1 accacctaawtagacgcttctgcacgttaactttggactcagtaactttttccaaatcgt 60
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 753 accacctaaatagacgcttctgcacgtaaactttggactcagtaactttttccaaatcgt 812
Query: 61 ctgagtttaaaaacgtctctggattcgttttatctatgayattgtwattkttgttctktt 120
||||||||||||||||||||||||||| ||||||||||| || || ||| ||||||| |
Sbjct: 813 ctgagtttaaaaacgtctctggattcgatttatctatgacatagtaattgttgttctgta 872
Query: 121 ccggttcwwtwtaggawtccgacacawatkawctgctttttgatcccgctcgayttctwt 180
||||||| | ||||| ||||||||| || | ||||||||||||||||||||| |||| |
Sbjct: 873 ccggttcaatataggaatccgacacaaatgaactgctttttgatcccgctcgacttctat 932
Query: 181 tggaagtwcccwttgwtcgtttattttgattttttacagcgtgtggagcwttctccttgt 240
||||||| ||| ||| |||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 933 tggaagtacccattgatcgtatattttgattttttacagcgtgtggagcattctccttgt 992
Query: 241 ggatattcacaacatctgaatacgttgaagcggagtctgttgattccaaggtcatcgcnn 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 ggatattcacaacatctgaatacgttgaagcggagtctgttgattccaaggtcatcgcaa 1052
Query: 301 cagcnanttgtttgtgntaactgnaggcaaagggattawtaattgagcctcggctgttct 360
|||| | ||| |||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 1053 cagcaaattgaatgtgaaaactgaaggcaaagggattaataattgagcctcggctgttct 1112
Query: 361 tatagawagctagaaccggctgaaatgtgatagagtccttctagtggtaaggttctgtat 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1113 tatagaaagctagaaccggctgaaatgtgatagagtccttctagtggtaaggttctgaat 1172
Query: 421 tctcagttatcctaaaactatttcactccgtcttataatgatgtgtaccgcagcaaagat 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 tctcagatatcctaaaactatttcactccgtcttataatgatgtgtaccgcagcaaagat 1232
Query: 481 taaccaaaggttttttagtaacgtgtaatatgctgtgggcctttagtaagtmtatttttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1233 taaccaaaggttttttagtaacgtgtaatatgctgtgggcctttagtaagtctatttttt 1292
Query: 541 tctttttaactttttagctactgactatactttcgtagtgtatgtctgcgaaactgtatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 tctttttaactttttagctactgactatactttcgtagtgtatgtctgcgaaactgtatt 1352
Query: 601 cacctggttctcaa 614
||||||||||||||
Sbjct: 1353 cacctggttctcaa 1366
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3446
Number of Sequences: 1807
Number of extensions: 3446
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 614
length of database: 10,358,551
effective HSP length: 16
effective length of query: 598
effective length of database: 10,329,639
effective search space: 6177124122
effective search space used: 6177124122
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)